Gene

smndc1

ID
ZDB-GENE-030131-614
Name
survival motor neuron domain containing 1
Symbol
smndc1 Nomenclature History
Previous Names
  • spf30 (1)
  • TDRD10 (1)
  • wu:fb37h07
  • wu:fc23a07
Type
protein_coding_gene
Location
Chr: 17 Mapping Details/Browsers
Description
Predicted to enable RNA binding activity. Predicted to act upstream of or within RNA splicing and mRNA processing. Predicted to be located in Cajal body; cytoplasm; and nuclear speck. Predicted to be part of spliceosomal complex. Predicted to be active in nucleus. Orthologous to human SMNDC1 (survival motor neuron domain containing 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With smndc1 Human Ortholog
No data available
Associated With smndc1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR002999 Tudor domain
Domain IPR010304 Survival motor neuron, Tudor domain
Domain Details Per Protein
Protein Length Survival motor neuron, Tudor domain Tudor domain
UniProtKB:Q7ZV80 237
UniProtKB:B2GRC5 237
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA smndc1-201 (1) Ensembl 1,440 nt
mRNA smndc1-202 (1) Ensembl 2,152 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations