Gene

ilf3b

ID

ZDB-GENE-030131-587

Name

interleukin enhancer binding factor 3b

Symbol

ilf3b Nomenclature History

Previous Names

ilf3
wu:fb37d07
wu:fb94b02
zgc:77030

Type

protein_coding_gene

Location

Chr: 3 Mapping Details/Browsers

Description

Predicted to enable double-stranded RNA binding activity; mRNA 3'-UTR AU-rich region binding activity; and single-stranded RNA binding activity. Predicted to act upstream of or within defense response to virus. Predicted to be located in cytoplasm and nucleolus. Orthologous to human ILF3 (interleukin enhancer binding factor 3).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

3 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7138939 (1 image)
IMAGE:7146385 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ilf3b Human Ortholog

No data available

Associated With ilf3b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR006561	DZF domain
Domain	IPR014720	Double-stranded RNA-binding domain
Domain	IPR033099	Interleukin enhancer-binding factor 3, first DSRM
Domain	IPR049401	DZF domain, N-terminal
Domain	IPR049402	DZF domain, C-terminal
Homologous_superfamily	IPR043519	Nucleotidyltransferase superfamily

Domain Details Per Protein

Protein	Length	Double-stranded RNA-binding domain	DZF domain	DZF domain, C-terminal	DZF domain, N-terminal	Interleukin enhancer-binding factor 3, first DSRM	Nucleotidyltransferase superfamily
UniProtKB:A0A8M3AXS5 InterPro	566
UniProtKB:A0A8M2BAZ5 InterPro	680
UniProtKB:A0A8M2BAV0 InterPro	823
UniProtKB:A0A8M2BAW0 InterPro	679
UniProtKB:A0A8M2BB13 InterPro	832
UniProtKB:Q6NXA4 InterPro	833

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	ilf3b-205 (1) Ensembl	Ensembl	801 nt	Select Tool ZFIN BLAST
mRNA	ilf3b-201 (1) Ensembl	Ensembl	780 nt	Select Tool ZFIN BLAST
mRNA	ilf3b-202 (1) Ensembl	Ensembl	3,305 nt	Select Tool ZFIN BLAST
mRNA	ilf3b-203 (1) Ensembl	Ensembl	1,360 nt	Select Tool ZFIN BLAST
mRNA	ilf3b-204 (1) Ensembl	Ensembl	729 nt	Select Tool ZFIN BLAST
mRNA	ilf3b-206 (1) Ensembl	Ensembl	1,124 nt	Select Tool ZFIN BLAST
mRNA	ilf3b-207 (1) Ensembl	Ensembl	5,157 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations