Gene
phf20l1
- ID
- ZDB-GENE-030131-5837
- Name
- PHD finger protein 20 like 1
- Symbol
- phf20l1 Nomenclature History
- Previous Names
-
- fi20g04
- si:dkey-97i18.2
- wu:fi20g04 (1)
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Description
- Predicted to enable metal ion binding activity. Predicted to be involved in histone acetylation and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of DNA-templated transcription. Predicted to be located in nucleus. Predicted to be part of NSL complex. Is expressed in cloaca; proctodeum; and telencephalon. Orthologous to human PHF20L1 (PHD finger protein 20 like 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 7 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7162257 (5 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR019786 | Zinc finger, PHD-type, conserved site |
| Domain | IPR001965 | Zinc finger, PHD-type |
| Domain | IPR002999 | Tudor domain |
| Domain | IPR013087 | Zinc finger C2H2-type |
| Domain | IPR014002 | Agenet domain, plant type |
| Domain | IPR040477 | Lysine-specific demethylase 4-like, Tudor domain |
| Domain | IPR047405 | PHD finger protein 20-like protein 1, Tudor domain |
| Family | IPR043449 | PHD finger protein 20-like |
| Homologous_superfamily | IPR011011 | Zinc finger, FYVE/PHD-type |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
Domain Details Per Protein
| Protein | Length | Agenet domain, plant type | Lysine-specific demethylase 4-like, Tudor domain | PHD finger protein 20-like | PHD finger protein 20-like protein 1, Tudor domain | Tudor domain | Zinc finger C2H2-type | Zinc finger, FYVE/PHD-type | Zinc finger, PHD-type | Zinc finger, PHD-type, conserved site | Zinc finger, RING/FYVE/PHD-type |
|---|---|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:A0A8M9PDN4
|
1116 | ||||||||||
|
UniProtKB:A0A8M9PDN8
|
1082 | ||||||||||
|
UniProtKB:A0A8M9NZQ6
|
1114 | ||||||||||
|
UniProtKB:A0A8M9PK38
|
1115 | ||||||||||
|
UniProtKB:A0A8M3B1U6
|
1115 | ||||||||||
|
UniProtKB:A0A8M9P8D3
|
1084 | ||||||||||
|
UniProtKB:A0A8M9PN32
|
1081 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
phf20l1-201
(1)
|
Ensembl | 4,381 nt | ||
| mRNA |
phf20l1-202
(1)
|
Ensembl | 838 nt | ||
| mRNA |
phf20l1-203
(1)
|
Ensembl | 2,967 nt |
Interactions and Pathways
No data available
Plasmids
No data available