Gene

gopc

ID

ZDB-GENE-030131-5086

Name

golgi-associated PDZ and coiled-coil motif containing

Symbol

gopc Nomenclature History

Previous Names

fe38f01
wu:fe38f01
zgc:56254
zgc:65853

Type

protein_coding_gene

Location

Chr: 20 Mapping Details/Browsers

Description

Predicted to be involved in cytoplasmic sequestering of CFTR protein. Predicted to localize to Golgi apparatus. Orthologous to human GOPC (golgi associated PDZ and coiled-coil motif containing).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:56254 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With gopc Human Ortholog

No data available

Associated With gopc Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001478	PDZ domain
Family	IPR038879	Golgi-associated PDZ and coiled-coil motif-containing protein
Homologous_superfamily	IPR036034	PDZ superfamily

Domain Details Per Protein

Protein	Length	Golgi-associated PDZ and coiled-coil motif-containing protein	PDZ domain	PDZ superfamily
UniProtKB:A0A8M2BHK3 InterPro	447
UniProtKB:Q6PHG0 InterPro	455

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	gopc-202 (1) Ensembl	Ensembl		2,153 nt	Select Tool
ncRNA	gopc-002 (1) Ensembl	Ensembl		728 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations