Gene

ssr4

ID
ZDB-GENE-030131-4900
Name
signal sequence receptor, delta
Symbol
ssr4 Nomenclature History
Previous Names
  • wu:fe06a08
  • zgc:86940
Type
protein_coding_gene
Location
Chr: 23 Mapping Details/Browsers
Description
Involved in cellular response to estrogen stimulus. Predicted to localize to endoplasmic reticulum and integral component of membrane. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Iy. Is expressed in several structures, including axis; endocrine system; hatching gland; notochord; and polster. Orthologous to human SSR4 (signal sequence receptor subunit 4).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
8 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Pickart et al., 2006
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ssr4 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
congenital disorder of glycosylation Iy Alliance Congenital disorder of glycosylation, type Iy 300934
Associated With ssr4 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR008855 Translocon-associated
Domain Details Per Protein
Protein Length Translocon-associated
UniProtKB:Q6IQ57 168
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ssr4-201 (1) Ensembl 1,009 nt
mRNA ssr4-203 (1) Ensembl 910 nt
ncRNA ssr4-003 (1) Ensembl 553 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations