Gene

ppp1r13bb

ID

ZDB-GENE-030131-4327

Name

protein phosphatase 1, regulatory subunit 13Bb

Symbol

ppp1r13bb Nomenclature History

Previous Names

ppp1r13b
fc90h02
si:ch211-253p18.1
wu:fc90h02

Type

protein_coding_gene

Location

Chr: 20 Mapping Details/Browsers

Description

Predicted to enable p53 binding activity. Predicted to act upstream of or within apoptotic process and negative regulation of cell cycle. Predicted to be active in nucleus. Orthologous to human PPP1R13B (protein phosphatase 1 regulatory subunit 13B).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ppp1r13bb Human Ortholog

No data available

Associated With ppp1r13bb Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001452	SH3 domain
Domain	IPR028319	Apoptosis-stimulating of p53 protein 1, RA domain
Domain	IPR048942	Apoptosis-stimulating of p53 protein 2-like, RA domain
Family	IPR047163	Apoptosis-stimulating of p53 protein 1/2
Homologous_superfamily	IPR029071	Ubiquitin-like domain superfamily
Homologous_superfamily	IPR036028	SH3-like domain superfamily
Homologous_superfamily	IPR036770	Ankyrin repeat-containing domain superfamily
Repeat	IPR002110	Ankyrin repeat

Domain Details Per Protein

Protein	Length	Ankyrin repeat	Ankyrin repeat-containing domain superfamily	Apoptosis-stimulating of p53 protein 1/2	Apoptosis-stimulating of p53 protein 1, RA domain	Apoptosis-stimulating of p53 protein 2-like, RA domain	SH3 domain	SH3-like domain superfamily	Ubiquitin-like domain superfamily
UniProtKB:A0A8M3AKR4 InterPro	1155
UniProtKB:A0A0R4IUG8 InterPro	1119
UniProtKB:A0A8M3AT48 InterPro	1163
UniProtKB:A5D6T8 InterPro	1069
UniProtKB:A0A8M3ALG4 InterPro	1051
UniProtKB:A0A2R8QDZ7 InterPro	1113

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ppp1r13bb-201 (1) Ensembl	Ensembl	4,511 nt	Select Tool ZFIN BLAST
mRNA	ppp1r13bb-203 (1) Ensembl	Ensembl	5,158 nt	Select Tool ZFIN BLAST
mRNA	ppp1r13bb-204 (1) Ensembl	Ensembl	4,928 nt	Select Tool ZFIN BLAST
mRNA	ppp1r13bb-205 (1) Ensembl	Ensembl	5,981 nt	Select Tool ZFIN BLAST
mRNA	ppp1r13bb-206 (1) Ensembl	Ensembl	5,519 nt	Select Tool ZFIN BLAST
ncRNA	ppp1r13bb-002 (1) Ensembl	Ensembl	707 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations