Gene

trim8b

ID
ZDB-GENE-030131-4325
Name
tripartite motif containing 8b
Symbol
trim8b Nomenclature History
Previous Names
  • trim8
  • si:ch211-208d15.5
  • wu:fc90g07 (1)
Type
protein_coding_gene
Location
Chr: 12 Mapping Details/Browsers
Description
Predicted to have metal ion binding activity. Localizes to nucleus. Is expressed in central nervous system; retina; and trigeminal placode. Orthologous to human TRIM8 (tripartite motif containing 8).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Micale et al., 2012
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With trim8b Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Focal segmental glomerulosclerosis and neurodevelopmental syndrome 619428
Associated With trim8b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017907 Zinc finger, RING-type, conserved site
Domain IPR001841 Zinc finger, RING-type
Family IPR051051 E3 ubiquitin-protein ligase TRIM/RNF
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Domain Details Per Protein
Protein Length E3 ubiquitin-protein ligase TRIM/RNF Zinc finger, RING/FYVE/PHD-type Zinc finger, RING-type Zinc finger, RING-type, conserved site
UniProtKB:B7ZVP9 564
UniProtKB:Q1MTE4 564
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA trim8b-201 (1) Ensembl 4,037 nt
mRNA trim8b-202 (1) Ensembl 329 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations