Gene

hmg20b

ID

ZDB-GENE-030131-4258

Name

high mobility group 20B

Symbol

hmg20b Nomenclature History

Previous Names

fc85b02
si:dkey-110c1.6 (1)
wu:fc85b02 (1)
zgc:110001

Type

protein_coding_gene

Location

Chr: 22 Mapping Details/Browsers

Description

Predicted to have DNA binding activity. Predicted to localize to nucleus. Orthologous to human HMG20B (high mobility group 20B).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:110001 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With hmg20b Human Ortholog

No data available

Associated With hmg20b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR009071	High mobility group box domain
Family	IPR051965	Chromatin Regulation and Neuronal Gene Expression
Homologous_superfamily	IPR036910	High mobility group box domain superfamily

Domain Details Per Protein

Protein	Length	Chromatin Regulation and Neuronal Gene Expression	High mobility group box domain	High mobility group box domain superfamily
UniProtKB:Q503Z1 InterPro	301
UniProtKB:A0A0R4IWQ8 InterPro	298

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	hmg20b-201 (1) Ensembl	Ensembl	1,555 nt	Select Tool
mRNA	hmg20b-202 (1) Ensembl	Ensembl	1,075 nt	Select Tool ZFIN BLAST
mRNA	hmg20b-203 (1) Ensembl	Ensembl	4,652 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations