Gene

vamp5

ID
ZDB-GENE-030131-4209
Name
vesicle-associated membrane protein 5
Symbol
vamp5 Nomenclature History
Previous Names
  • fc83b05
  • si:dkeyp-86b9.2
  • wu:fc83b05
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to have SNAP receptor activity and syntaxin-1 binding activity. Predicted to be involved in SNARE complex assembly. Predicted to localize to SNARE complex and plasma membrane. Orthologous to human VAMP5 (vesicle associated membrane protein 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With vamp5 Human Ortholog
No data available
Associated With vamp5 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR042581 VAMP5, SNARE motif
Domain IPR042855 v-SNARE, coiled-coil homology domain
Family IPR001388 Synaptobrevin-like
Family IPR042166 Vesicle-associated membrane protein 5
Domain Details Per Protein
Protein Length Synaptobrevin-like VAMP5, SNARE motif Vesicle-associated membrane protein 5 v-SNARE, coiled-coil homology domain
UniProtKB:A2BG37 112
UniProtKB:A2BG36 111
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA vamp5-201 (1) Ensembl 1,084 nt
mRNA vamp5-203 (1) Ensembl 1,381 nt
ncRNA vamp5-003 (1) Ensembl 873 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations