Gene
prdm1a
- ID
- ZDB-GENE-030131-2193
- Name
- PR domain containing 1a, with ZNF domain
- Symbol
- prdm1a Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Description
- Exhibits DNA-binding transcription factor activity. Involved in several processes, including embryonic pectoral fin morphogenesis; positive regulation of cell differentiation; and skeletal system morphogenesis. Predicted to localize to cytoplasm and nucleus. Is expressed in several structures, including digestive system; ectoderm; fin bud; mesoderm; and nervous system. Orthologous to human PRDM1 (PR/SET domain 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 58 figures from 32 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7136589 (15 images)
Wild Type Expression Summary
- All Phenotype Data
- 39 figures from 20 publications
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001214 | SET domain |
| Domain | IPR013087 | Zinc finger C2H2-type |
| Domain | IPR044413 | PRDM1, PR/SET domain |
| Family | IPR016608 | PR domain zinc finger protein 1 |
| Family | IPR050331 | Zinc finger |
| Homologous_superfamily | IPR036236 | Zinc finger C2H2 superfamily |
| Homologous_superfamily | IPR046341 | SET domain superfamily |
Domain Details Per Protein
| Protein | Length | PRDM1, PR/SET domain | PR domain zinc finger protein 1 | SET domain | SET domain superfamily | Zinc finger | Zinc finger C2H2 superfamily | Zinc finger C2H2-type |
|---|---|---|---|---|---|---|---|---|
|
UniProtKB:Q68EH4
|
776 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
prdm1a-201
(1)
|
Ensembl | 3,694 nt |
Interactions and Pathways
No data available
Plasmids
No data available