Gene

gatm

ID
ZDB-GENE-021015-1
Name
glycine amidinotransferase (L-arginine:glycine amidinotransferase)
Symbol
gatm Nomenclature History
Previous Names
  • agat (1)
  • cb409 (1)
  • wu:fa08a06
Type
protein_coding_gene
Location
Chr: 18 Mapping Details/Browsers
Description
Predicted to have glycine amidinotransferase activity. Predicted to be involved in creatine biosynthetic process. Predicted to localize to mitochondrion. Human ortholog(s) of this gene implicated in AGAT deficiency. Is expressed in several structures, including digestive system; mesoderm; musculature system; ovary; and yolk syncytial layer. Orthologous to human GATM (glycine amidinotransferase).
Genome Resources
Note
Added for the Thisse expression data.
Comparative Information
Expression
All Expression Data
11 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With gatm Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
AGAT deficiency Alliance Cerebral creatine deficiency syndrome 3 612718
Fanconi renotubular syndrome 1 Alliance Fanconi renotubular syndrome 1 134600
Associated With gatm Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR033195 Glycine/inosamine-phosphate amidinotransferase
Domain Details Per Protein
Protein Length Glycine/inosamine-phosphate amidinotransferase
UniProtKB:Q6PH19 422
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
aberrant processed transcript gatm-204 (1) Ensembl 729 nt
mRNA gatm-201 (1) Ensembl 1,974 nt
mRNA gatm-202 (1) Ensembl 872 nt
mRNA gatm-205 (1) Ensembl 829 nt
ncRNA gatm-005 (1) Ensembl 856 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations