Gene

esr1

ID
ZDB-GENE-020806-5
Name
estrogen receptor 1
Symbol
esr1 Nomenclature History
Previous Names
  • ER[a] (1)
  • ERalpha (1)
  • NR3A1 (1)
  • zfER[a] (1)
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Exhibits estrogen receptor activity; nuclear receptor activity; and steroid hormone binding activity. Involved in several processes, including cellular response to estrogen stimulus; posterior lateral line neuromast primordium migration; and response to estradiol. Predicted to localize to nucleus. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); bone disease (multiple); breast cancer (multiple); rheumatic disease (multiple); and type 2 diabetes mellitus. Is expressed in several structures, including diencephalon; head; liver; male organism; and pleuroperitoneal region. Orthologous to human ESR1 (estrogen receptor 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
50 figures from 33 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
12 figures from 4 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With esr1 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
breast cancer Alliance Breast cancer, somatic 114480
migraine Alliance {Migraine, susceptibility to} 157300
Estrogen resistance 615363
{Myocardial infarction, susceptibility to} 608446
Associated With esr1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000536 Nuclear hormone receptor, ligand-binding domain
Domain IPR001628 Zinc finger, nuclear hormone receptor-type
Domain IPR046944 Estrogen receptor, N-terminal
Family IPR001292 Estrogen receptor
Family IPR001723 Nuclear hormone receptor
Family IPR024178 Estrogen receptor/oestrogen-related receptor
Family IPR050200 Nuclear hormone receptor family NR3 subfamily
Homologous_superfamily IPR013088 Zinc finger, NHR/GATA-type
Homologous_superfamily IPR035500 Nuclear hormone receptor-like domain superfamily
Domain Details Per Protein
Protein Length Estrogen receptor Estrogen receptor, N-terminal Estrogen receptor/oestrogen-related receptor Nuclear hormone receptor Nuclear hormone receptor family NR3 subfamily Nuclear hormone receptor, ligand-binding domain Nuclear hormone receptor-like domain superfamily Zinc finger, NHR/GATA-type Zinc finger, nuclear hormone receptor-type
UniProtKB:P57717 569
UniProtKB:A0A8M3B0Y2 613
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA esr1-201 (1) Ensembl 1,728 nt
mRNA esr1-202 (1) Ensembl 3,449 nt
mRNA esr1-203 (1) Ensembl 212 nt
mRNA esr1-204 (1) Ensembl 1,996 nt
Interactions and Pathways
Antibodies
No data available
Plasmids
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations