Gene

cldna

ID

ZDB-GENE-010328-1

Name

claudin a

Symbol

cldna Nomenclature History

Previous Names

cldn30a (1)
fb99d09
wu:fb99d09 (1)

Type

protein_coding_gene

Location

Chr: 15 Mapping Details/Browsers

Description

Predicted to have structural molecule activity. Predicted to localize to bicellular tight junction; integral component of membrane; and plasma membrane. Human ortholog(s) of this gene implicated in ovarian cancer and pancreatic cancer. Is expressed in female organism; otic epithelium; otic vesicle; and sensory system. Orthologous to human CLDN4 (claudin 4).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

28 figures from 22 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With cldna Human Ortholog

No data available

Associated With cldna Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR004031	PMP-22/EMP/MP20/Claudin
Family	IPR006187	Claudin

Domain Details Per Protein

Protein	Length	Claudin	PMP-22/EMP/MP20/Claudin
UniProtKB:A0A8M1P6R7 InterPro	206
UniProtKB:Q90XS1 InterPro	206

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	cldna-201 (1) Ensembl	Ensembl		1,943 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations