Gene

vtg6

ID

ZDB-GENE-001201-5

Name

vitellogenin 6

Symbol

vtg6 Nomenclature History

Previous Names

vg6
si:rp71-23d18.1
wu:fb62e09

Type

protein_coding_gene

Location

Chr: 22 Mapping Details/Browsers

Description

Predicted to have lipid transporter activity. Predicted to be involved in cellular response to estrogen stimulus and response to estradiol. Is expressed in intestine; liver; ovary; and unfertilized egg.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

13 figures from 9 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With vtg6 Human Ortholog

No data available

Associated With vtg6 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001747	Vitellogenin, N-terminal
Domain	IPR015255	Vitellinogen, open beta-sheet
Domain	IPR015258	Vitellinogen, beta-sheet shell
Family	IPR050733	Vitellogenin/Apolipophorin
Homologous_superfamily	IPR011030	Lipovitellin-phosvitin complex, superhelical domain
Homologous_superfamily	IPR015816	Vitellinogen, beta-sheet N-terminal
Homologous_superfamily	IPR015817	Vitellinogen, open beta-sheet, subdomain 1
Homologous_superfamily	IPR015819	Lipid transport protein, beta-sheet shell
Homologous_superfamily	IPR037088	Vitellinogen, beta-sheet shell domain superfamily

Domain Details Per Protein

Protein	Length	Lipid transport protein, beta-sheet shell	Lipovitellin-phosvitin complex, superhelical domain	Vitellinogen, beta-sheet N-terminal	Vitellinogen, beta-sheet shell	Vitellinogen, beta-sheet shell domain superfamily	Vitellinogen, open beta-sheet	Vitellinogen, open beta-sheet, subdomain 1	Vitellogenin/Apolipophorin	Vitellogenin, N-terminal
UniProtKB:A0A8M1NG90 InterPro	1374

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	vtg6-204 (1) Ensembl	Ensembl	4,225 nt	Select Tool ZFIN BLAST
ncRNA	vtg6-002 (1) Ensembl	Ensembl	979 nt	Select Tool ZFIN BLAST
ncRNA	vtg6-003 (1) Ensembl	Ensembl	818 nt	Select Tool ZFIN BLAST
ncRNA	vtg6-004 (1) Ensembl	Ensembl	876 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations