Gene

vtg4

ID

ZDB-GENE-001201-3

Name

vitellogenin 4

Symbol

vtg4 Nomenclature History

Previous Names

vg4
si:rp71-23d18.3
wu:fb59b02
wu:fb59d07
wu:fb59e10
zgc:136286
zgc:136383

Type

protein_coding_gene

Location

Chr: 22 Mapping Details/Browsers

Description

Predicted to have lipid transporter activity. Predicted to be involved in cellular response to estrogen stimulus and response to estradiol. Localizes to protein-containing complex. Is expressed in intestine and liver.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

11 figures from 9 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With vtg4 Human Ortholog

No data available

Associated With vtg4 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001747	Vitellogenin, N-terminal
Domain	IPR015255	Vitellinogen, open beta-sheet
Domain	IPR015258	Vitellinogen, beta-sheet shell
Family	IPR050733	Vitellogenin/Apolipophorin
Homologous_superfamily	IPR011030	Lipovitellin-phosvitin complex, superhelical domain
Homologous_superfamily	IPR015816	Vitellinogen, beta-sheet N-terminal
Homologous_superfamily	IPR015817	Vitellinogen, open beta-sheet, subdomain 1
Homologous_superfamily	IPR015819	Lipid transport protein, beta-sheet shell
Homologous_superfamily	IPR037088	Vitellinogen, beta-sheet shell domain superfamily

Domain Details Per Protein

Protein	Length	Lipid transport protein, beta-sheet shell	Lipovitellin-phosvitin complex, superhelical domain	Vitellinogen, beta-sheet N-terminal	Vitellinogen, beta-sheet shell	Vitellinogen, beta-sheet shell domain superfamily	Vitellinogen, open beta-sheet	Vitellinogen, open beta-sheet, subdomain 1	Vitellogenin/Apolipophorin	Vitellogenin, N-terminal
UniProtKB:Q1LWN5 InterPro	1362
UniProtKB:Q1RM99 InterPro	258
UniProtKB:A0A8M1NAN4 InterPro	1358

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	vtg4-202 (1) Ensembl	Ensembl	4,225 nt	Select Tool ZFIN BLAST
ncRNA	vtg4-002 (1) Ensembl	Ensembl	756 nt	Select Tool ZFIN BLAST
ncRNA	vtg4-003 (1) Ensembl	Ensembl	840 nt	Select Tool ZFIN BLAST
ncRNA	vtg4-004 (1) Ensembl	Ensembl	721 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations