ZFIN ID: ZDB-GENE-980526-35

Mapping Details

Gene Name: transferrin-a
Symbol: tfa
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN JBrowse 2 16,780,643 - 16,792,188 GRCz11
Ensembl 2 16,780,643 - 16,792,188 GRCz11
Vega 2 17,112,053 - 17,123,598 GRCv10
NCBI Map Viewer 2 16,780,634 - 16,792,177 GRCz11
UCSC 2 - GRCz11
UCSC 2 - GRCz11
Mapped Clones containing tfa
DKEY-263H23 Chr: 19 Details
CH73-211A15 Chr: 2 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
sa12059 2 16,785,590 GRCz11 Busch-Nentwich et al., 2013
2 17,117,000 GRCz10 Busch-Nentwich et al., 2013
2 16,587,983 Zv9 Busch-Nentwich et al., 2013
sa15651 2 16,791,648 GRCz11 Busch-Nentwich et al., 2013
2 17,123,058 GRCz10 Busch-Nentwich et al., 2013
2 16,581,925 Zv9 Busch-Nentwich et al., 2013
sa19720 2 16,783,633 GRCz11 Busch-Nentwich et al., 2013
2 17,115,043 GRCz10 Busch-Nentwich et al., 2013
2 16,589,940 Zv9 Busch-Nentwich et al., 2013
sa32878 2 16,787,666 GRCz11 Busch-Nentwich et al., 2013
2 17,119,076 GRCz10 Busch-Nentwich et al., 2013
2 16,585,907 Zv9 Busch-Nentwich et al., 2013
sa32879 2 16,783,485 GRCz11 Busch-Nentwich et al., 2013
2 17,114,895 GRCz10 Busch-Nentwich et al., 2013
2 16,590,088 Zv9 Busch-Nentwich et al., 2013
sa44526 2 16,787,666 GRCz11 Busch-Nentwich et al., 2013
2 16,585,907 Zv9 Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
2 77.0 cM tfa Mother of Pearl (MOP) Postlethwait, John H. Data
2 203.87 cR tfa Loeb/NIH/5000/4000 (LN54) Dawid, Igor B. Data
2 2024.0 cR tfa Goodfellow T51 (T51) Geisler, Robert Data
2 37.69 cM tfa Gates et al (GAT) Talbot, William S. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION
Markers Encoded by tfa
fb62h02 Chr: 2 Details
IMAGE:3815706 Chr: 2 Details
Genomic Feature tzhe067 is an allele of tfa
Marker Type Chr Distance Publication / Person Comments
z9354 SSLP 2 Fraenkel et al., 2009 Fraenkel et al (2009)localized tzhe067 to chromosome 2 using bulk segregant  ...
z4300 SSLP 2 Fraenkel et al., 2009 Fraenkel et al (2009)localized tzhe067 to chromosome 2 using bulk segregant  ...
z26250 SSLP 2 Fraenkel et al., 2009 Fraenkel et al (2009)localized tzhe067 to chromosome 2 using bulk segregant  ...
Genomic Feature tzhe067 is an allele of tfa
Chr 2 Fraenkel et al., 2009 Fraenkel et al (2009)localized tzhe067 to chromosome 2 using bulk segregant mapping. Intermediate  ...
Primer Sets:
Strain Bandsize Restriction Enzyme Annealing Temperature [C]
SJD 167 36.0
Forward Primer CGATATGATTGAGAGGACCTACAA
Reverse Primer TCATTTCATCCCCTTTTGTGATA