Genomic Feature

hg131

ID
ZDB-ALT-220103-11
Name
hg131
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with CRISPR
Lab of Origin
Sood Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 10: 3943294 - 3943297 (GRCz11) (1) Details
Nucleotide change
agag/-
Variant Notes
Deletion 4 bp in exon 5, cDNA: 1291delAGAG, p. Arg431Profs*9
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted in Exon 5 (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
Amino Acid Substitution: Arg>Pro at position 431 (1)
Sequences
Flanking Sequence
ATATATATTATATAATACAATGATCGAGGCCTGAAACATCAGCTTTCTCTGTCATCATGTTCTCTTTTTCTTCTCCACAGGCAGCATCTTCAGCCCTCAGCAGCCTGGGTCACGTCTACACAGCCATCGGGGACTATCCCAACGCTCTGGCCAGTCACAAGCAGTGCGTCCTGCTGGCCAAACAGTCCAAAGACCAGCTGTCTGAGGCCCGCGAGCTGGGCAACATGGGCGCAGTCTACATCGCGATGGGCGACTTTGACAACGCTGTGCAGTGCCACGAGCAGCACCTGAGCATCGCCAAGAGCCTCGGCAACAAGCGCGAGGAGGCCCGAGCCTACAGCAACCTGGGTAGCGCTTACCACTACCGCCGCAACTTCGACAAGGCCATGTCCTACCACACGCACGTGCTGGAGCTGGCGCAGGAGCTGGAGGAGAAGAGCATCGAGATGAGGGCGTACGCCGGCCTGGGACACGCTGCCCGCTGCATGCAGGACCTGGAG
agag/- CCAAGCAGTACCATGAGCAGCAGCTGAGCATCGCTGAAGGCCTGAAGGACAGAGCCGCCGAGGGCAGGGCTTCATCTAACCTGGGTGAGCATACTGTTGTTTCTCTTTTAGTAGTTTTAGGGACTTTGTCGTATACATTAGTGTGCAAAAGTGATAGCCCCCAGTCAAATGTGTTGTTTTAGTGAGAGTATAATGACATTATACATTATTTCTCACTCTGTTTATTAAAATACAACCAGAAAATACAGGTTCCAGTTGGACTTTTTTGGTCTAATTGTTTAAGACCATAGACTGTAAAATATATGGACGTAGTGTCCGTGACGTCACCCATAGGTTTCTAAAGAGCGCAAGAGAAGCCACAAGTAGGCGCGGCCAACCGTCGCCATTTTGTTCGCGCGTCATCACACCCACGGCGGGATACCAAACAAGGGCAAAGAGGCGGAGAGTGAGCGGAGCTACAGACACCTGCAGACAGTTTGCTTGGACCTGATTCAGACACA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations