Genomic Feature

ct873

ID
ZDB-ALT-191211-1
Name
ct873
Synonyms
  • ct845 (1)
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Prober Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 8: 30680987 - 30681005 (GRCz11) (1) Details
Nucleotide change
CTCCACCCTACAGAAAGAG/CTACAGAAAGAA
Variant Notes
The mutated A2aaAR protein lacks transmembrane domains 6 and 7, which contain  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
12 bp inserted / 19 bp deleted in Exon 3 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TGTTTTTAAGAGGTGTTCAGGTTTACAGCCATGCTGCCATTTGTTTACTTGTGTCAGTACTTTGAACCTTTTAGATGTGCAGTCTAGACAATGTGGAACAAACATTTATGGTCAGGGAGTAAAAAAAAAAAACATGCTTCTTCTTTCAACATAATTTCCTTTCACTCTTCCAGGTACAACAGCCTAGTAACCGGGCAGCGCGCCAGAGGCATCATCGCGATCTGCTGGGTCCTGTCAGTTATCATCGGTCTAACACCCATGCTGGGCTGGCACAAAGCCCGCTTACAAGAGGGCCACAATGGCACTTGCCCACCCGGCATGATGGAGTGTTTGTTCGAGGAGGTGGTGGTCATGGACTACATGGTCTACTTCAACTTCTTCGCCTGCGTTCTGGTGCCTCTGCTCCTCATGCTGGCCATTTATCTACGCATCTTCATGGCTGCTCGCCACCAACTTAAATGCATCGAGTCCAAAGCCATCCCATGTGAACTCAAGTCCCG
CTCCACCCTACAGAAAGAG/CTACAGAAAGAA GTCCATGCGGCGAAATCGCTAGCCATCATCGTTGGTTTGTTTGCTGTTTGTTGGTTGCCCCTTCACATCATCAACTGTTTCACTCTGTTCTGCCCTGAATGTGAACGGCCGCCGGCTCTGATCATGTATCTGGCTATAATCCTCTCACACGCAAACTCAGTGGTAAATCCCTTTATTTACGCCTACAGAATACGAGAGTTCAGACACACTTTCCGGAAGATCGTCCGCTATCATATTTTGGGCAGAAGGGAGCCTCTTTCATGCAACGGAAGCACTCGTACTTCAACCCGAACGAGCGTAGCGGATTCGCTCCGGATTAAAGTCAATGGTCTGGTGCGCGAACTGTACGCCGAGCAGAGCAGCACCACGAGCAGCTGCGAAAGTGCTGAACCCGGACATACACACAGGCCAGTAAGCACTGAAAACTCCATTTTAGACAACCAGCCAATAGAAATCAGTAATTCCCACAGACACACGGCACTGAGGCATCCGGAGTCGCC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations