Transcript

tbk1-006

ID
ZDB-TSCRIPT-210816-2
Name
tbk1-006 Nomenclature History
Previous Names
  • TBK1_tv3 (1)
Transcript Type
mRNA
Annotation Status
published
Annotation Method
Associated With Genes
Strain
Non Reference Strain
Genome Resources
None
RNA Central
None
Note
TBK1_tv3 (GenBank accession no. MT430746). By sequence aligning with TBK1 normal form, TBK1_tv3 lacks exons 14–17,9 bp at the C terminal of exon 13, 34 bp at the N terminal of exon18, and 17 bp in the middle of exon 19, which leads to an in-frame deletion of the C-terminal CCD2 domain of TBK1(amino acids 658–713).Different from zebrafishTBK1_tv1 and TBK1_tv2 (18), TBK1_tv3 is generated by exonskipping with the usage of the same ATG transcription start siteand different stop codon site.
Sequence
ZFINNUCL0000006168 (1) [ Show ] (double-click sequence to select) [Download]
>lcl|ZFINNUCL0000006168|ZDB-TSCRIPT-210816-2 publishedRNA tbk1-006 mRNA published 1722 bp
ATGCAGAGTACGGCCAATTACTTGTGGATGATGTCCGACC
TGCTGGGTCAGGGAGCCACAGCTAACGTGTACCGCGGTCG
ACACAAGAAAACAGGCGATCTGTACGCCGTCAAAGTGTTC
AACAACCTGAGTTTCCTGCGGCCGCTGGACGTGCAGATGA
GGGAGTTTGAGGTGCTGAAGAAACTCAATCACAAGAACAT
CGTCAAGCTGTTCGCCGTCGAGGAGGAGTCGAACACACGT
CATAAGGTGCTGGTGATGGAGTACTGCCCCTGCGGGAGTC
TCTACACCGTCCTGGAGGAGCCCACCAATGCGTACGGCCT
GCCGGAGGACGAGTTCCTCATCGTTCTGCAGGACGTCGTG
GCGGGAATGAATCACCTGCGCGAGTACGGCATCGTGCATC
GAGACATCAAGCCAGGGAACATCATGCGAGTGATCGGAGA
CGACGGATTCTCTGTGTACAAACTCACCGACTTCGGAGCC
GCTCGCGAACTGGAGGACGACGAGCAGTCCGTATCGCTGT
ACGGCACAGAGGAGTATCTGCATCCAGACATGTACGAGCG
GGCGGTGCTGAGGAAAGACCACCAGAAGAAATACGGCGCT
ACGGTGGATCTGTGGAGCATCGGAGTCACGTTTTACCACG
CCGCCACCGGCAGCCTGCCGTTCAGACCCTTCGAAGGGCC
GCGCAGAAACAAAGAAGTCATGTATAAGATCATCACAGAG
AAGCCCCCCGGCGCCATCTCCGGACACCAGAAGTTTGAAA
ATGGGAAGATCGAGTGGAGCTCCGAGATGCCCATCTCCTG
CAGCCTGTCCAAGGGTCTGCAGAGCCTCCTGACGCCGGTG
CTGGCGAATATCCTGGAAGCGGATCAGGAGAAGTGCTGGG
GGTTTGATCAGTTCTTCGCAGAGACCAGCGACATCTTACA
CCGCATCGTGGTCTACGTCTTCAGTCTGCAGCAGGCCACG
CTGCACCACGTCTACATACACACTTACAACACAGCGAACC
TCTTCCAGGAGCTGCTGTTCAGACGCACCAACATCACTCC
GTCCCATCAGGAGCTGCTCTACGAGGGCCGACGGCTCGTC
CTCGACCCCAACCGGCAAGCACAAACCTTTCCCAAGACCT
CCAGAGACAATCCCATCATGCTCCTGTGCAGAGACCCCGT
CAACACCGTCGGCCTGCTGTTTGAGGACCCCAGCCCACCC
AAAGTACAGCCGCGCTACGACCTGGACCTGGACGCCAGCT
ACGCCAAGACGTTCGCAGGTGATGTGGGATACCTGTGGAA
AACATCAGATTCTCTGCTTCTGTACCAGGAGCTGGTGAGG
AAAGGAGTCCGAGGCCTGAATGAGCTGATCAGAGATGAGT
ACAGTGAGACGATGCACAAGAAGACGGAGGTGTTCCACCT
GTGCAGCCACTGCAGCCTGACACTGGAGCGCAGCGAACAA
CTCTGTGAGGCGCTGATGCAGGGAAATATCCTGTCAGCCG
AGTATGACGAGATCCGAGACACCAGGAAGAAGGTGCTGCG
GCTCTCAGGCTCTCTAGCCTCTATGGATCAGACTCTGCAG
GACATCAACAGCATGTTCCTGCCCGGAGGAAGCCTGACCG
ACACCTGGACGCAGCAGGTGGGAACACACCCCGATGGCGT
CTGGTGTCCTGAAGCCGCAGGCGTATCTGAGCCCCAGCAC
ACTCGTGGAGATGACCCTTGGGATGAAGAAACTGAAGGGT
GA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations